arcfish.pp

Data loading

pp.FOF_CT_Loader	Read in FOF_CT file(s).
pp.add_cell_type	Add cell type information to adata.

Preprocessing

pp.filter_normalize	Filter outliers and normalized by 1D genomic distance.
pp.joint_filter_normalize	Filter and normalize multiple adata.
pp.median_pdist	Compute median pairwise distance matrix.
pp.pseudo_count	Thresholding pairwise distances to create a count matrix.